Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_01016Large repetitive protein. (1747 aa)    
Predicted Functional Partners:
ECL_01017
Large repetitive protein.
 
    
0.808
ECL_01015
Large repetitive protein.
 
    
0.793
ECL_03982
Type I secretion system ATPase family protein.
 
  
 0.739
ECL_02074
Type I secretion membrane protein, ATP binding protein, protein export.
 
  
 0.727
ECL_00379
ABC transporter, ATP-binding component.
 
  
 0.723
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
  0.653
ECL_01042
Type I secretion system ATPase.
 
  
 0.651
ompA-2
Putative outer membrane lipoprotein.
 
  
  0.633
ECL_02741
Hypothetical protein.
  
  
 0.624
ECL_03981
TolC family type I secretion outer membrane protein.
 
  
 0.588
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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