Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_01302Predicted antirepressor protein Cro. (77 aa)    
Predicted Functional Partners:
ECL_04602
Glutamate synthase large subunit.
     
  0.797
ECL_01303
Regulatory protein CII.
       0.716
ECL_01301
Putative phage represso.
  
  
 0.615
ECL_01305
DNA replication protein gp18.
       0.546
ECL_01308
Hypothetical protein.
       0.501
ECL_01304
Gp53.
       0.482
ECL_01306
Replicative DNA helicase.
     
 0.482
ECL_01307
Ren protein from phage origin.
       0.482
ECL_01309
Hypothetical protein.
       0.482
ECL_01310
Hypothetical protein.
       0.482
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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