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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECL_01409Type 1 pili usher pathway chaperone CsuC. (253 aa)    
Predicted Functional Partners:
ECL_01411
Spore coat U domain-containing protein.
 
 
 0.992
ECL_01408
Spore coat U domain-containing protein.
 
 
 0.990
ECL_01407
Putative Type I pilus protein CsuA/B.
 
 
 0.984
ECL_01410
Fimbrial biogenesis outer membrane usher protein.
 
 
 0.982
ECL_02932
Outer membrane usher protein lpfC.
  
   0.841
ECL_04445
Outer membrane usher protein.
  
   0.827
ECL_01104
Hypothetical protein.
 
   0.813
ECL_02380
Outer membrane usher protein LpfC.
  
   0.810
ECL_00064
Putative outer membrane usher protein FimD.
  
   0.780
mrfC
Fimbrial biogenesis outer membrane usher protein.
  
   0.778
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.