Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
impEType VI secretion system protein ImpE. (270 aa)    
Predicted Functional Partners:
impF
Type VI secretion system protein ImpF.
 
    0.995
impB
Type VI secretion system protein ImpB.
 
   0.993
impG
Type VI secretion system protein ImpG.
 
  
 0.991
impK
Type VI secretion system protein ImpK.
 
  
 0.988
impB-2
Type VI secretion system protein ImpB.
 
   0.984
impM
Type VI secretion system protein ImpM.
 
  
 0.977
impH
Type VI secretion system protein ImpH.
 
    0.965
impC
Type VI secretion system protein ImpC.
 
    0.960
ECL_01544
FHA domain-containing protein.
 
    0.947
vasG
Type VI secretion system protein VasG; Belongs to the ClpA/ClpB family.
 
  
 0.943
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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