STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
impGType VI secretion system protein ImpG. (625 aa)    
Predicted Functional Partners:
impE
Type VI secretion system protein ImpE.
 
  
 0.991
impK
Type VI secretion system protein ImpK.
 
  
 0.988
impF
Type VI secretion system protein ImpF.
 
  
 0.986
impH
Type VI secretion system protein ImpH.
 
  
 0.982
vasE
Type VI secretion system protein ImpJ.
 
 
 0.975
ECL_01803
Hypothetical protein.
 
 
 0.969
ECL_01544
FHA domain-containing protein.
 
  
 0.968
impC
Type VI secretion system protein ImpC.
 
  
 0.959
impB
Type VI secretion system protein ImpB.
 
  
 0.957
impB-2
Type VI secretion system protein ImpB.
 
  
 0.944
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.