Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_01686Phage terminase large subunit. (700 aa)    
Predicted Functional Partners:
ECL_01688
Phage portal protein, lambda family.
 
  
 0.970
ECL_01689
Hypothetical protein; Belongs to the peptidase S14 family.
 
    0.938
ECL_01703
Conserved hypothetical protein.
 
    0.917
ECL_04407
Major tail sheath protein.
 
  
 0.875
ECL_04406
Major tail tube protein.
 
  
 0.851
ECL_04413
Phage baseplate assembly-like protein.
 
  
 0.843
ECL_01685
Conserved hypothetical protein.
  
    0.835
ECL_04411
Baseplate assembly protein J (GpJ).
 
  
 0.830
ECL_04401
Phage late control D family protein.
 
  
 0.827
ECL_04410
Putative phage tail protein.
 
  
 0.825
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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