Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_01784Hypothetical protein. (350 aa)    
Predicted Functional Partners:
ECL_01839
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.972
ECL_01785
Xylose isomerase domain-containing protein.
 
  
 0.969
ECL_01781
Multiple sugar transport system periplasmic sugar-binding protein.
 
   
 0.944
ECL_01786
Oxidoreductase domain-containing protein.
 
 
 0.939
ECL_01782
Multiple sugar transport system permease protein.
 
   
 0.905
ECL_01787
Kojibiose phosphorylase.
 
   
 0.898
ECL_01783
Multiple sugar transport system permease protein.
 
   
 0.884
ECL_03001
PTS system, fructose-specific II ABC component.
 
 
 0.832
ECL_01788
Beta-phosphoglucomutase.
 
     0.819
ECL_03470
Hypothetical protein.
     
  0.793
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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