Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ECL_01945LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
ECL_02248
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.758
ECL_04085
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.751
ECL_03990
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.741
ECL_03530
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.740
ECL_04512
DNA-binding transcriptional activator TdcA; Belongs to the LysR transcriptional regulatory family.
  
     0.738
ECL_04626
Putative DNA-binding transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.736
ECL_04166
DNA-binding transcriptional regulator LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.728
ECL_00005
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.713
ECL_00727
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.709
ECL_02096
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.709
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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