Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
livH-2Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (524 aa)    
Predicted Functional Partners:
livM-2
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livK-2
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.995
livF-2
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.993
livG-2
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.992
ECL_02957
Putative amino acid transporter.
 
 
 0.961
ECL_04813
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.950
ECL_04814
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.950
livG
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.948
livM
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.947
livK
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.894
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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