Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_02099Hypothetical protein. (175 aa)    
Predicted Functional Partners:
ECL_02103
Plasmid partition ParA protein.
 
  
 0.979
ECL_02105
Short-chain dehydrogenase/reductase SDR.
 
    0.975
ECL_02104
Amine oxidase.
 
   
 0.953
ECL_02106
Hypothetical protein.
 
     0.949
ECL_02100
Hypothetical protein.
 
   
 0.945
ECL_02102
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.925
ECL_02101
Hypothetical protein.
       0.803
ECL_01422
Major facilitator transporter.
 
  
 0.489
ECL_02179
Hypothetical protein.
 
  
 0.482
ECL_00617
Putative oligogalacturonide transporter.
 
  
 0.470
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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