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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECL_02167Hypothetical protein. (860 aa)    
Predicted Functional Partners:
ECL_03390
Putative sensor protein.
 
0.986
ECL_04591
Aerobic respiration control sensor protein ArcB.
 
 0.976
ECL_00393
Diguanylate cyclase with PAS/PAC sensor.
 
0.971
ECL_01825
Diguanylate cyclase with PAS/PAC sensor.
 
0.971
ECL_04118
Hybrid sensory histidine kinase BarA.
 
 
 0.966
ECL_04635
Regulatory protein CsrD.
 
 0.963
ECL_04648
Diguanylate cyclase/phosphodiesterase.
 
0.961
ECL_03619
Putative chemotaxis signal trancription protein.
  
 0.958
ECL_00717
PAS sensor protein.
 
 0.957
ECL_04457
Methyl-accepting chemotaxis sensory transducer.
   
 0.952
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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