Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_02492Diguanylate cyclase. (490 aa)    
Predicted Functional Partners:
ECL_04591
Aerobic respiration control sensor protein ArcB.
 
 0.894
ECL_02493
Hypothetical protein.
 
     0.864
ECL_04118
Hybrid sensory histidine kinase BarA.
 0.864
ECL_04934
Putative phosphodiesterase.
  
  0.830
ECL_01111
Hypothetical protein.
 
 
  0.827
ECL_03390
Putative sensor protein.
 
0.819
ECL_01489
Diguanylate phosphodiesterase.
  
 
  0.817
ECL_03393
Hypothetical protein.
  
 
  0.817
ECL_03495
Hypothetical protein.
  
 
  0.815
ECL_02070
Hypothetical protein.
  
 
  0.812
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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