Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ECL_02653Allantoate transport membrane protein. (221 aa)    
Predicted Functional Partners:
fliY
Cystine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  0.982
ECL_02920
Glutamine ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
  0.982
ECL_02651
Allantoate transport ATPase protein.
 
 0.981
ECL_02811
Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family.
  0.977
ECL_02654
Allantoate transport periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.965
ECL_02808
Arginine transporter, periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
  0.964
ECL_01371
Cystine transport system ATP-binding protein.
 
 0.913
ECL_01877
Amino acid ABC transporter, ATP-binding subunit.
 
 0.913
ECL_02922
Glutamine ABC transporter ATP-binding protein.
 
 0.912
ECL_04655
Eneral L-amino acid transport system ATP-binding protein.
 
 0.911
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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