Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_02695Paraquat-inducible protein B. (546 aa)    
Predicted Functional Partners:
ECL_02696
PqiA family integral membrane protein.
 
 
 0.988
ECL_02694
Hypothetical protein.
 
   
 0.961
ECL_01468
PqiA family integral membrane protein.
 
 
 0.946
ECL_04575
Putative ABC transport system substrate-binding protein.
  
  
 0.714
ECL_04577
Putative ABC transport system ATP-binding protein.
    
 0.691
ECL_04576
Putative ABC transport system permease protein.
 
  
 0.679
ECL_04574
Toluene tolerance protein Ttg2D.
  
  
 0.666
ECL_01479
Conserved hypothetical protein.
   
    0.530
ECL_04573
STAS domain-containing protein.
     
 0.526
ECL_02697
Putative ABC transporter ATPase component.
       0.498
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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