Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_03362Psb3. (236 aa)    
Predicted Functional Partners:
ECL_03360
Psb6.
 
 
 0.995
ECL_03361
Psb4.
 
  
 0.987
ECL_03364
Psb1.
 
  
 0.984
ECL_03363
Psb2; Belongs to the DegT/DnrJ/EryC1 family.
 
   
 0.976
wzx
Lipopolysaccharide biosynthesis protein.
 
   
 0.868
ECL_04580
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
 
   0.863
lgt
Beta-galactosamide-alpha-2,3-sialyltransferase.
     
 0.860
ECL_03356
Glycosyl transferase, family 2/glycosyl transferase family 8.
 
   
 0.765
ECL_00673
Putative dihydrodipicolinate synthetase.
     
 0.733
wzy
Hypothetical protein.
       0.689
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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