Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_03396Conserved hypothetical protein. (224 aa)    
Predicted Functional Partners:
ECL_03398
Putative outer membrane usher protein.
  
 0.902
ECL_03397
Putative fimbrial protein.
     
 0.794
ECL_00072
Hypothetical protein.
  
 0.651
ECL_03399
Putative fimbrial protein.
  
   
0.637
ECL_03400
Fimbrillin MatB.
  
  
 0.564
ECL_03394
Hypothetical protein.
       0.528
ECL_03395
Hypothetical protein.
       0.528
ECL_00064
Putative outer membrane usher protein FimD.
   
  0.520
ECL_00091
P pilus assembly protein, porin PapC.
   
  0.520
ECL_00371
Outer membrane usher protein PmfC.
   
  0.520
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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