Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ECL_03420Putative regulatory protein. (193 aa)    
Predicted Functional Partners:
ECL_04602
Glutamate synthase large subunit.
    
 
 0.766
ECL_04053
LacI family transcription regulator.
  
     0.765
ECL_00622
LacI family transcription regulator.
  
     0.762
ECL_03163
LacI family transcription regulator.
  
     0.760
ECL_02640
Sugar binding transcriptional regulator, LacI family.
  
     0.759
ECL_00659
Trehalose repressor.
  
     0.758
ECL_04158
DNA-binding transcriptional regulator GalR.
  
     0.758
ECL_03460
DNA-binding transcriptional regulator GalS.
  
     0.757
ECL_01933
Hypothetical protein.
  
     0.756
ECL_00219
LacI family transcription regulator.
  
     0.750
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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