Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_03436Signal transduction histidine kinase, LytS. (561 aa)    
Predicted Functional Partners:
ECL_03435
Putative two-component response-regulatory protein YehT.
 
 0.999
ECL_03725
Putative response regulator in two-component system.
 
 0.965
ECL_03434
Hypothetical protein.
 
   
 0.763
ECL_00430
Hypothetical protein.
  
 0.564
ECL_00226
Oxalate/formate antiporter.
 
   
 0.483
ECL_04301
Two-component system, CitB family, cit operon sensor histidine kinase CitA.
  
   
 0.433
ECL_00717
PAS sensor protein.
    
 0.428
ECL_00747
Carbon starvation protein CstA.
 
   
 0.405
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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