Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_03475Sugar efflux transporter. (393 aa)    
Predicted Functional Partners:
ECL_02265
Hypothetical protein.
  
     0.610
ECL_02991
Cell envelope integrity inner membrane protein TolA.
  
     0.584
ECL_03473
Bifunctional fructose-specific PTS IIA/HPr protein.
 
   
 0.565
ECL_02304
oriC-binding nucleoid-associated protein.
  
     0.557
ECL_03474
Hypothetical protein.
       0.546
ECL_03470
Hypothetical protein.
   
 
 0.501
ompC
OmpC porin; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family.
  
     0.486
ECL_04985
Adenylate cyclase; Belongs to the adenylyl cyclase class-1 family.
  
     0.479
ECL_01192
Hypothetical protein.
  
     0.459
ECL_00270
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.431
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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