Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_03495Hypothetical protein. (518 aa)    
Predicted Functional Partners:
ECL_00393
Diguanylate cyclase with PAS/PAC sensor.
 0.952
ECL_01986
Diguanylate cyclase with GAF sensor.
 
 0.900
ECL_01987
Putative diguanylate cyclase.
 
 
  0.895
ECL_01825
Diguanylate cyclase with PAS/PAC sensor.
 0.883
ECL_02490
Diguanylate cyclase with GAF sensor.
 
 0.883
ECL_01143
Diguanylate cyclase AdrA.
 
 
 0.859
ECL_02159
Diguanylate cyclase.
  
 
 0.852
ECL_04635
Regulatory protein CsrD.
  
 
 0.848
ECL_03390
Putative sensor protein.
 
 0.847
ECL_00780
Diguanylate cyclase.
 
 
 0.840
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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