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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECL_03633LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (315 aa)    
Predicted Functional Partners:
ECL_04166
DNA-binding transcriptional regulator LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.760
ECL_03324
Nitrogen assimilation transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.698
ECL_03996
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.698
ECL_04626
Putative DNA-binding transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.687
ECL_00325
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.667
ECL_02248
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.657
ECL_01006
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.653
ECL_01094
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.646
ECL_04085
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.629
ECL_01100
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.612
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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