STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsBRibose transport system substrate-binding protein. (309 aa)    
Predicted Functional Partners:
ECL_04118
Hybrid sensory histidine kinase BarA.
   
 0.988
ECL_04591
Aerobic respiration control sensor protein ArcB.
  
 0.987
ECL_04447
Two-component system, NarL family, sensor histidine kinase EvgS.
   
 0.976
rbsC
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.959
rbsA
Ribose transport system ATP-binding protein.
 
 0.953
rcsC
Two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
  
 0.942
ECL_05131
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.929
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.928
lsrC
AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.914
ECL_03095
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.911
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.