Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECL_04053LacI family transcription regulator. (371 aa)    
Predicted Functional Partners:
ECL_04602
Glutamate synthase large subunit.
    
 
 0.766
ECL_03420
Putative regulatory protein.
  
     0.765
ECL_04054
Cellobiose/arbutin/salicin-specific PTS system components IIBC.
    
 0.694
ECL_04055
Cryptic 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.686
ECL_03036
N-acetyl glucosamine specific PTS system components IIABC.
    
 0.620
ECL_04052
Electron transport protein.
       0.567
ECL_04049
High-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.565
ECL_04050
Hydrogenase maturation protein HypF.
       0.533
ECL_04051
Hydrogenase maturation protein HypF.
       0.533
ECL_01770
Peptide transport system permease.
   
  
 0.434
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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