Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lsrCAI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (343 aa)    
Predicted Functional Partners:
lsrA
AI-2 transport system ATP-binding protein.
 0.999
lsrB
AI-2 transport system substrate-binding protein.
 0.991
rbsA
Ribose transport system ATP-binding protein.
 0.942
lsrD
AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.937
rbsB
Ribose transport system substrate-binding protein.
 
 0.932
rbsA-3
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.919
xylG
Xylose transporter ATP-binding subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 0.918
rbsA-2
Ribose ABC superfamily ATP binding component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.916
ECL_05130
Ribose transport system substrate-binding protein.
 0.913
mglA
Methyl-galactoside transport system ATP-binding protein.
 0.907
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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