Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ECL_04493D-galactonate transporter. (432 aa)    
Predicted Functional Partners:
ECL_04494
DNA-binding transcriptional repressor ExuR.
 
   
 0.807
ECL_04267
Major facilitator transporter.
  
  
  0.643
ECL_04161
GntR family transcriptional regulator.
  
   
 0.507
ECL_00783
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.480
ECL_04168
Hypothetical protein.
 
     0.466
ECL_04259
Major facilitator superfamily transporter.
  
    0.457
uxaB
Altronate oxidoreductase; Belongs to the mannitol dehydrogenase family. UxaB subfamily.
 
   
 0.452
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.444
ECL_00105
Hypothetical protein.
  
    0.434
ECL_00798
Hypothetical protein.
  
     0.420
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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