STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_0037Conserved hypothetical protein. (727 aa)    
Predicted Functional Partners:
wza
Periplasmic protein involved in polysaccharide export.
 
  
 0.800
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.751
wcw_1222
Hypothetical protein.
  
     0.720
aas1
Acylglycerophosphoethanolamine acyltransferase / acyl-ACP synthetase; Non-ribosomal peptide synthetase modules and related proteins.
   
 0.708
aas3
Acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase; Non-ribosomal peptide synthetase modules and related proteins.
   
 0.708
greA
Uncharacterized N-terminal domain of the transcription elongation factor GreA; Belongs to the GreA/GreB family.
 
    0.705
wcw_1167
Conserved hypothetical protein.
 
     0.654
wcw_1948
Putative transcription factor, CoiA-like family; Competence protein.
  
     0.649
gspD
Putative general secretion pathway protein D; Type II secretory pathway, component PulD.
  
     0.603
mreC
Putative Rod shape-determining protein mreC; Cell shape-determining protein.
  
     0.596
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.