STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wzcWzc putative Tyrosine-protein kinase; Uncharacterized protein involved in exopolysaccharide biosynthesis. (939 aa)    
Predicted Functional Partners:
wza
Periplasmic protein involved in polysaccharide export.
  
 
 0.945
manC
Mannose-1-phosphate guanylyltransferase/mannose- 6-phosphate isomerase; Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.521
ompA2
Putative membrane protein.
       0.468
wcaJ
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.451
flaA1
FlaA1, SDR superfamily member with inverting 4,6- dehydratase activity; Predicted nucleoside-diphosphate sugar epimerases.
  
  
 0.451
wcw_1009
Putative low molecular weight protein-tyrosine- phosphatase; Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.422
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.