wcw_0109 protein (Waddlia chondrophila) - STRING interaction network

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Score

wcw_0109

Putative deoxyribonuclease TatD family protein; Mg-dependent DNase. (260 aa)

Predicted Functional Partners:

pyrF

0.899

psdD

0.785

ksgA

0.776

tdk3

0.683

pyrE

0.644

fabD

0.626

wcw_0110

0.536

secDF

0.512

metG

0.462

rnc

0.429

Your Current Organism:

Waddlia chondrophila

NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fabD	ksgA	wcw_1188	wcw_1517	Malonyl CoA-acyl carrier protein transacylase; Membrane protease subunits, stomatin/prohibitin homologs.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.467
fabD	tdk3	wcw_1188	wcw_1014	Malonyl CoA-acyl carrier protein transacylase; Membrane protease subunits, stomatin/prohibitin homologs.	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.	0.601
fabD	wcw_0109	wcw_1188	wcw_0109	Malonyl CoA-acyl carrier protein transacylase; Membrane protease subunits, stomatin/prohibitin homologs.	Putative deoxyribonuclease TatD family protein; Mg-dependent DNase.	0.626
ksgA	fabD	wcw_1517	wcw_1188	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Malonyl CoA-acyl carrier protein transacylase; Membrane protease subunits, stomatin/prohibitin homologs.	0.467
ksgA	metG	wcw_1517	wcw_0709	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.542
ksgA	rnc	wcw_1517	wcw_0252	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.436
ksgA	wcw_0109	wcw_1517	wcw_0109	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Putative deoxyribonuclease TatD family protein; Mg-dependent DNase.	0.776
metG	ksgA	wcw_0709	wcw_1517	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.542
metG	rnc	wcw_0709	wcw_0252	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.417
metG	secDF	wcw_0709	wcw_1680	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Putative bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.	0.670
metG	wcw_0109	wcw_0709	wcw_0109	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Putative deoxyribonuclease TatD family protein; Mg-dependent DNase.	0.462
psdD	wcw_0109	wcw_0108	wcw_0109	Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).	Putative deoxyribonuclease TatD family protein; Mg-dependent DNase.	0.785
psdD	wcw_0110	wcw_0108	wcw_0110	Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).	Hypothetical protein.	0.536
pyrE	pyrF	wcw_0337	wcw_0336	Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).	Orotidine-5'-phosphate decarboxylase.	0.999
pyrE	wcw_0109	wcw_0337	wcw_0109	Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).	Putative deoxyribonuclease TatD family protein; Mg-dependent DNase.	0.644
pyrF	pyrE	wcw_0336	wcw_0337	Orotidine-5'-phosphate decarboxylase.	Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).	0.999
pyrF	wcw_0109	wcw_0336	wcw_0109	Orotidine-5'-phosphate decarboxylase.	Putative deoxyribonuclease TatD family protein; Mg-dependent DNase.	0.899
rnc	ksgA	wcw_0252	wcw_1517	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.436
rnc	metG	wcw_0252	wcw_0709	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.417
rnc	wcw_0109	wcw_0252	wcw_0109	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Putative deoxyribonuclease TatD family protein; Mg-dependent DNase.	0.429