STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_0135Putative permease for cytosine/purines, uracil, thiamine, allantoin; Purine-cytosine permease and related proteins. (392 aa)    
Predicted Functional Partners:
wcw_0136
Conserved hypothetical protein.
 
     0.951
carAB
Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarA family.
   
    0.951
wcw_0137
Putative Hydantoinase/oxoprolinase protein family; N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
     0.950
wcw_0134
Hypothetical protein.
       0.773
pyrB
Aspartate carbamoyltransferase, catalytic subunit; Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.542
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
   
    0.541
wcw_1966
Putative membrane protein.
  
     0.448
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.