STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_0139Putative trehalose/maltose hydrolase; Trehalose and maltose hydrolases (possible phosphorylases). (815 aa)    
Predicted Functional Partners:
wcw_0140
Beta-phosphoglucomutase hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.997
wcw_0141
Lipid A disaccharide synthase.
       0.588
wcw_0142
Conserved hypothetical protein.
       0.588
wcw_0138
Hypothetical protein.
       0.556
wcw_0143
Permeases of the major facilitator superfamily.
       0.539
wcw_1880
Putative trehalose synthase/maltokinase; Glycosidases.
 
  
 0.498
wcw_0373
HAD-superfamily hydrolase.
 
  
 0.493
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.