wcw_0171 protein (Waddlia chondrophila) - STRING interaction network

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Score

wcw_0171

Conserved hypothetical protein; Predicted exonuclease of the beta-lactamase fold involved in RNA processing. (451 aa)

Predicted Functional Partners:

wcw_1152

0.990

rbp

0.857

rpoB

0.754

rpoA

0.684

polA

0.683

wcw_0172

0.595

sbcD

0.534

rpoN

0.405

Your Current Organism:

Waddlia chondrophila

NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
polA	rpoB	wcw_1645	wcw_0592	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.469
polA	sbcD	wcw_1645	wcw_0420	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.	0.993
polA	wcw_0171	wcw_1645	wcw_0171	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Conserved hypothetical protein; Predicted exonuclease of the beta-lactamase fold involved in RNA processing.	0.683
rbp	rpoA	wcw_0715	wcw_1481	RNA-binding proteins (RRM domain).	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.785
rbp	rpoB	wcw_0715	wcw_0592	RNA-binding proteins (RRM domain).	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.768
rbp	wcw_0171	wcw_0715	wcw_0171	RNA-binding proteins (RRM domain).	Conserved hypothetical protein; Predicted exonuclease of the beta-lactamase fold involved in RNA processing.	0.857
rbp	wcw_1152	wcw_0715	wcw_1152	RNA-binding proteins (RRM domain).	Hypothetical protein; FOG: WD40 repeat.	0.743
rpoA	rbp	wcw_1481	wcw_0715	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA-binding proteins (RRM domain).	0.785
rpoA	rpoB	wcw_1481	wcw_0592	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoN	wcw_1481	wcw_0173	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.	0.898
rpoA	wcw_0171	wcw_1481	wcw_0171	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein; Predicted exonuclease of the beta-lactamase fold involved in RNA processing.	0.684
rpoA	wcw_0172	wcw_1481	wcw_0172	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein; Transcriptional accessory protein.	0.874
rpoA	wcw_1152	wcw_1481	wcw_1152	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein; FOG: WD40 repeat.	0.766
rpoB	polA	wcw_0592	wcw_1645	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.469
rpoB	rbp	wcw_0592	wcw_0715	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA-binding proteins (RRM domain).	0.768
rpoB	rpoA	wcw_0592	wcw_1481	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoN	wcw_0592	wcw_0173	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.	0.875
rpoB	wcw_0171	wcw_0592	wcw_0171	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein; Predicted exonuclease of the beta-lactamase fold involved in RNA processing.	0.754
rpoB	wcw_0172	wcw_0592	wcw_0172	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Conserved hypothetical protein; Transcriptional accessory protein.	0.870
rpoB	wcw_1152	wcw_0592	wcw_1152	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein; FOG: WD40 repeat.	0.779