STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntt1ADP/ATP translocase. (520 aa)    
Predicted Functional Partners:
plsB
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.761
wcw_0378
Conserved hypothetical protein.
  
     0.683
nhaD
Putative Na+/H+ antiporter, NhaD family; Na+/H+ antiporter NhaD and related arsenite permeases.
 
     0.617
fabI
Enoyl-[acyl-carrier-protein] reductase (NADH).
  
     0.554
wcw_0211
Conserved hypothetical protein.
       0.446
wcw_0212
Putative monovalent cation transporter, sodium/hydrogen exchanger family; Kef-type K+ transport systems, membrane components; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.446
sctC
Putative type III secretion protein SctC; Type II secretory pathway, component PulD; Belongs to the bacterial secretin family.
      
 0.431
wcw_0906
Conserved hypothetical protein; Glycosyltransferases, probably involved in cell wall biogenesis.
  
     0.403
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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