STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppFATP binding protein, component of oligopeptide permease; ABC-type oligopeptide transport system, ATPase component. (272 aa)    
Predicted Functional Partners:
oppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.981
wcw_0578
Putative ABC-type transporter, ATPase subunit; ABC-type sugar transport systems, ATPase components.
 
    
0.906
wcw_0361
Putative ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components.
 
    
0.903
wcw_0362
Putative ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components.
 
    
0.886
oppB
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.859
oppD
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  
0.858
msbA
Putative Lipid A export ATP-binding/permease protein; ABC-type multidrug transport system, ATPase and permease components.
 
     
0.820
wcw_0294
Permeases of the major facilitator superfamily.
       0.762
oppA
ABC-type dipeptide transport system, periplasmic component.
 
    0.737
wcw_0291
Putative phosphate transport regulator; Na+/phosphate symporter.
       0.595
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.