STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_0751Hypothetical protein; Ubiquitin carboxyl-terminal hydrolase. (645 aa)    
Predicted Functional Partners:
wcw_0974
Serine/threonine protein phosphatase.
  
     0.773
wcw_0084
SET domain protein.
  
     0.711
wcw_1002
Hypothetical protein.
  
     0.679
glmU3
UDP-glucose pyrophosphorylase.
  
     0.613
wcw_1814
Serine/threonine protein kinase.
  
     0.568
wcw_0121
Putative dual specificity phosphatase.
  
     0.560
wcw_1837
Putative tyrosine-protein phosphatase; Protein tyrosine phosphatase.
  
     0.556
nsfA
Putative vesicle-fusing ATPase; ATPases with chaperone activity, ATP-binding subunit.
  
     0.547
ide
Putative ptr insulinase family/protease III; Secreted/periplasmic Zn-dependent peptidases, insulinase-like; Belongs to the peptidase M16 family.
  
     0.503
pyrF
Orotidine-5'-phosphate decarboxylase.
  
     0.495
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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