STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_0906Conserved hypothetical protein; Glycosyltransferases, probably involved in cell wall biogenesis. (279 aa)    
Predicted Functional Partners:
wcw_0905
Conserved hypothetical protein; Predicted Fe-S-cluster oxidoreductase.
       0.773
wcw_0437
Putative glycosidase/glycosyltransferase; 1,4-alpha-glucan branching enzyme.
  
 0.610
wcw_0907
Conserved hypothetical protein; Predicted Zn peptidase.
       0.548
wcw_0378
Conserved hypothetical protein.
  
  
 0.531
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.510
plsB
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.485
wcw_0037
Conserved hypothetical protein.
 
  
 0.461
ntt5
Putative ADP/ATP translocase; ATP/ADP translocase.
  
     0.450
ntt4
Putative ADP/ATP translocase; ATP/ADP translocase.
  
     0.448
aas1
Acylglycerophosphoethanolamine acyltransferase / acyl-ACP synthetase; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.428
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.