STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_0960Conserved hypothetical protein. (225 aa)    
Predicted Functional Partners:
wcw_0958
Conserved hypothetical protein; FOG: TPR repeat.
 
     0.809
mgtE
Putative Mg2+ transporter; Mg/Co/Ni transporter MgtE (contains CBS domain).
 
     0.804
wcw_1167
Conserved hypothetical protein.
  
     0.758
wcw_0569
Conserved hypothetical protein; Predicted Rossmann fold nucleotide-binding protein.
  
     0.749
wcw_1035
Conserved hypothetical protein.
  
     0.742
wcw_0843
Conserved hypothetical protein; FOG: WD40 repeat.
  
     0.734
sctD
Putative type III secretion system protein SctD; FOG: FHA domain.
  
     0.719
wcw_1522
Conserved hypothetical protein; FOG: TPR repeat.
  
     0.716
wcw_0801
Uncharacterized protein conserved in bacteria.
  
     0.687
wcw_1976
Uncharacterized protein conserved in bacteria.
  
     0.662
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
Server load: low (24%) [HD]