STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_0967Conserved hypothetical protein. (280 aa)    
Predicted Functional Partners:
wcw_1167
Conserved hypothetical protein.
 
     0.789
wcw_0569
Conserved hypothetical protein; Predicted Rossmann fold nucleotide-binding protein.
  
     0.763
wcw_0801
Uncharacterized protein conserved in bacteria.
  
     0.755
sctD
Putative type III secretion system protein SctD; FOG: FHA domain.
 
     0.755
wcw_1035
Conserved hypothetical protein.
  
     0.754
wcw_1976
Uncharacterized protein conserved in bacteria.
  
     0.739
wcw_0843
Conserved hypothetical protein; FOG: WD40 repeat.
  
     0.726
pbp2
Cell division protein FtsI/penicillin-binding protein 2.
 
   
 0.721
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
  
     0.676
yaeL
Metalloprotease; Predicted membrane-associated Zn-dependent proteases 1.
  
     0.675
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.