STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aas3Acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase; Non-ribosomal peptide synthetase modules and related proteins. (914 aa)    
Predicted Functional Partners:
wcw_0031
Putative membrane protein; Permeases of the major facilitator superfamily.
 
 0.997
aas1
Acylglycerophosphoethanolamine acyltransferase / acyl-ACP synthetase; Non-ribosomal peptide synthetase modules and related proteins.
 
0.997
wcw_1368
Hypothetical protein.
  
 0.982
wcw_1970
Pyridine nucleotide-disulfide oxidoreductase; NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.967
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.953
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
   
 
 0.950
wcw_1764
Conserved hypothetical protein; Zn-dependent hydrolases, including glyoxylases.
  
 
 0.944
fabD
Malonyl CoA-acyl carrier protein transacylase; Membrane protease subunits, stomatin/prohibitin homologs.
  
 0.935
wcw_1968
Conserved hypothetical protein.
  
 
 0.932
rplQ
Ribosomal protein L17.
   
   0.930
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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