STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_1742Transposase and inactivated derivatives. (170 aa)    
Predicted Functional Partners:
wcw_1741
Transposase.
 
     0.939
wcw_0734
Putative transposase.
  
     0.745
wcw_0623
Putative transposase.
  
     0.649
wcw_0835
Predicted transposase.
  
     0.649
wcw_1899
Transposase and inactivated derivatives.
  
     0.649
wcw_0549
Transposase.
  
     0.645
wcw_1740
Hypothetical protein.
       0.555
wcw_1876
Transposase and inactivated derivatives, IS5 family.
  
     0.471
wcw_1930
Hypothetical protein.
  
     0.453
wcw_0660
Transposase and inactivated derivatives, IS5 family.
  
     0.415
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.