STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_1966Putative membrane protein. (1291 aa)    
Predicted Functional Partners:
wcw_1967
Cytochrome b/b6 domain-containing protein; Cytochrome b subunit of the bc complex.
 
 
 0.998
wcw_1968
Conserved hypothetical protein.
 
 
 0.998
fixO
Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
 
 0.995
fixN
Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.990
cyoC
Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 
 0.961
cyoA
Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 
 0.919
norB
Nitric oxide reductase large subunit.
  
 
 0.916
wcw_0515
Putative cytochrome c family protein; Cytochrome c, mono- and diheme variants.
 
 
 
 0.911
cyoB
Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.909
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.891
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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