Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDZ79625.1 | pepT | SAMN02982996_00240 | SAMN02982996_00638 | Dinuclear metal center protein, YbgI/SA1388 family. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.419 |
| SDZ81238.1 | gshA | SAMN02982996_00307 | SAMN02982996_03043 | Peroxiredoxin Q/BCP. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.631 |
| SDZ81238.1 | pepT | SAMN02982996_00307 | SAMN02982996_00638 | Peroxiredoxin Q/BCP. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.460 |
| SDZ98367.1 | pepT | SAMN02982996_00637 | SAMN02982996_00638 | FeoC like transcriptional regulator; May function as a transcriptional regulator that controls feoABC expression. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.413 |
| SEA11668.1 | glyA | SAMN02982996_01015 | SAMN02982996_03136 | Aminopeptidase N. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.697 |
| SEA11668.1 | gshA | SAMN02982996_01015 | SAMN02982996_03043 | Aminopeptidase N. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.642 |
| SEA11668.1 | pepT | SAMN02982996_01015 | SAMN02982996_00638 | Aminopeptidase N. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.545 |
| SEA11668.1 | secD | SAMN02982996_01015 | SAMN02982996_00416 | Aminopeptidase N. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.630 |
| SEA68394.1 | SEA69634.1 | SAMN02982996_02189 | SAMN02982996_02231 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.803 |
| SEA68394.1 | glyA | SAMN02982996_02189 | SAMN02982996_03136 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.496 |
| SEA68394.1 | pepT | SAMN02982996_02189 | SAMN02982996_00638 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.438 |
| SEA69634.1 | SEA68394.1 | SAMN02982996_02231 | SAMN02982996_02189 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.803 |
| SEA69634.1 | glyA | SAMN02982996_02231 | SAMN02982996_03136 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.654 |
| SEA69634.1 | pepQ | SAMN02982996_02231 | SAMN02982996_02147 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.528 |
| SEA69634.1 | pepT | SAMN02982996_02231 | SAMN02982996_00638 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.495 |
| glyA | SEA11668.1 | SAMN02982996_03136 | SAMN02982996_01015 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminopeptidase N. | 0.697 |
| glyA | SEA68394.1 | SAMN02982996_03136 | SAMN02982996_02189 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.496 |
| glyA | SEA69634.1 | SAMN02982996_03136 | SAMN02982996_02231 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.654 |
| glyA | pepT | SAMN02982996_03136 | SAMN02982996_00638 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.607 |
| gshA | SDZ81238.1 | SAMN02982996_03043 | SAMN02982996_00307 | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | Peroxiredoxin Q/BCP. | 0.631 |
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