STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA02535.1tRNA_anti-like. (258 aa)    
Predicted Functional Partners:
SEA02389.1
Anthranilate synthase component 2.
  
 
  0.798
SEA09874.1
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.
   
 
  0.774
SEA09917.1
Aminodeoxychorismate synthase, component I.
   
 
  0.774
SEA04531.1
Cellobiose phosphorylase.
  
 
  0.751
SDZ86871.1
Subtilase-type serine protease.
  
 
 0.726
SEA91366.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes.
   
 
  0.724
SEA22814.1
Adhesin/invasin.
  
 
 0.655
SEA38123.1
Glycosyl hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
   
 
  0.630
SEA19486.1
Quinoprotein glucose dehydrogenase.
    
  0.593
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
    
  0.591
Your Current Organism:
Lonsdalea quercina
NCBI taxonomy Id: 71657
Other names: ATCC 29281, Brenneria quercina, CCUG 48867, CFBP 3617, CIP 105201, DSM 4561, Erwinia quercina, L. quercina, LMG 2724, LMG:2724
Server load: low (22%) [HD]