Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA29742.1 | SEB02051.1 | SAMN02982996_01390 | SAMN02982996_03287 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 2-iminoacetate synthase. | 0.599 |
SEA29742.1 | SEB02088.1 | SAMN02982996_01390 | SAMN02982996_03289 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Sulfur carrier protein. | 0.926 |
SEA29742.1 | SEB02112.1 | SAMN02982996_01390 | SAMN02982996_03290 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Sulfur carrier protein ThiS adenylyltransferase. | 0.684 |
SEA29742.1 | psiE | SAMN02982996_01390 | SAMN02982996_01389 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Protein PsiE. | 0.475 |
SEA29742.1 | thiC | SAMN02982996_01390 | SAMN02982996_03292 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.975 |
SEA29742.1 | thiE | SAMN02982996_01390 | SAMN02982996_03291 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
SEA29742.1 | thiG | SAMN02982996_01390 | SAMN02982996_03288 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.908 |
SEA29742.1 | thiM | SAMN02982996_01390 | SAMN02982996_01391 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.999 |
SEA70031.1 | SEA87260.1 | SAMN02982996_02243 | SAMN02982996_02757 | Sn-glycerol 3-phosphate transport system substrate-binding protein. | Sn-glycerol 3-phosphate transport system substrate-binding protein. | 0.697 |
SEA70031.1 | thiM | SAMN02982996_02243 | SAMN02982996_01391 | Sn-glycerol 3-phosphate transport system substrate-binding protein. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.482 |
SEA87260.1 | SEA70031.1 | SAMN02982996_02757 | SAMN02982996_02243 | Sn-glycerol 3-phosphate transport system substrate-binding protein. | Sn-glycerol 3-phosphate transport system substrate-binding protein. | 0.697 |
SEA87260.1 | thiM | SAMN02982996_02757 | SAMN02982996_01391 | Sn-glycerol 3-phosphate transport system substrate-binding protein. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.482 |
SEB02051.1 | SEA29742.1 | SAMN02982996_03287 | SAMN02982996_01390 | 2-iminoacetate synthase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.599 |
SEB02051.1 | SEB02088.1 | SAMN02982996_03287 | SAMN02982996_03289 | 2-iminoacetate synthase. | Sulfur carrier protein. | 0.981 |
SEB02051.1 | SEB02112.1 | SAMN02982996_03287 | SAMN02982996_03290 | 2-iminoacetate synthase. | Sulfur carrier protein ThiS adenylyltransferase. | 0.976 |
SEB02051.1 | thiC | SAMN02982996_03287 | SAMN02982996_03292 | 2-iminoacetate synthase. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.983 |
SEB02051.1 | thiE | SAMN02982996_03287 | SAMN02982996_03291 | 2-iminoacetate synthase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.986 |
SEB02051.1 | thiG | SAMN02982996_03287 | SAMN02982996_03288 | 2-iminoacetate synthase. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.998 |
SEB02051.1 | thiM | SAMN02982996_03287 | SAMN02982996_01391 | 2-iminoacetate synthase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.572 |
SEB02088.1 | SEA29742.1 | SAMN02982996_03289 | SAMN02982996_01390 | Sulfur carrier protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.926 |
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