STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA76144.1PTS IIA-like nitrogen-regulatory protein PtsN. (169 aa)    
Predicted Functional Partners:
SEA50743.1
PTS system, fructose-specific IIC component.
 
 
 0.961
SEA29885.1
PTS system, mannitol-specific IIC component.
 
 
 0.945
SEA76087.1
Phosphocarrier protein NPr.
 
 
 0.934
SEA76201.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.917
SEA76175.1
Putative sigma-54 modulation protein.
 
  
 0.913
SDZ99835.1
PTS system, mannose-specific IIB component.
 
 
 0.911
SEA50813.1
Phosphocarrier protein FPr.
 
 
0.901
rapZ
UPF0042 nucleotide-binding protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily.
  
  
 0.889
SEA50773.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.868
SEA62083.1
PTS system ascorbate-specific IIB component, L-Asc family (TC 4.A.7.1.1)/PTS system ascorbate-specific IIC component, L-Asc family (TC 4.A.7.1.1).
  
 
 0.861
Your Current Organism:
Lonsdalea quercina
NCBI taxonomy Id: 71657
Other names: ATCC 29281, Brenneria quercina, CCUG 48867, CFBP 3617, CIP 105201, DSM 4561, Erwinia quercina, L. quercina, LMG 2724, LMG:2724
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