STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA77273.1Glutathionylspermidine synthase. (386 aa)    
Predicted Functional Partners:
SEA77298.1
Uncharacterized conserved protein YgiB, involved in bioifilm formation, UPF0441/DUF1190 family.
 
  
 0.957
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
    
  0.604
SEA60521.1
NADPH-glutathione reductase.
     
 0.601
SDZ83302.1
Cysteine synthase A.
  
     0.496
SEA49703.1
Glutaredoxin 1.
     
 0.463
SEA82775.1
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit.
     
 0.439
SEA77245.1
Sel1 repeat-containing protein.
       0.432
SEA77323.1
Outer membrane protein.
       0.417
SDZ96646.1
Hypothetical protein.
  
  
  0.410
Your Current Organism:
Lonsdalea quercina
NCBI taxonomy Id: 71657
Other names: ATCC 29281, Brenneria quercina, CCUG 48867, CFBP 3617, CIP 105201, DSM 4561, Erwinia quercina, L. quercina, LMG 2724, LMG:2724
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