STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA86205.1Two-component system, CitB family, sensor histidine kinase DcuS. (537 aa)    
Predicted Functional Partners:
SEA47968.1
Two-component system, CitB family, response regulator CitB.
 
 0.981
SEA86232.1
Two-component system, CitB family, response regulator DcuR.
 
  
 0.980
SEA76976.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
  
 
 0.845
SEA35311.1
Two-component system, NarL family, sensor histidine kinase BarA.
     
 0.843
rcsC
Two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
  
  
 0.790
SEA04219.1
Methyl-accepting chemotaxis sensory transducer with TarH sensor.
    
 0.740
SEA47936.1
Two-component system, CitB family, cit operon sensor histidine kinase CitA.
 
  
0.702
SDZ84627.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
     
 0.566
SEA86180.1
Divalent anion:Na+ symporter, DASS family.
  
  
 0.526
SEA86257.1
malate:Na+ symporter.
 
  
 0.523
Your Current Organism:
Lonsdalea quercina
NCBI taxonomy Id: 71657
Other names: ATCC 29281, Brenneria quercina, CCUG 48867, CFBP 3617, CIP 105201, DSM 4561, Erwinia quercina, L. quercina, LMG 2724, LMG:2724
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