A0A182F4Y4 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182F4Y4

ERCC4 domain-containing protein. (459 aa)

Predicted Functional Partners:

A0A182FAU7

0.993

A0A182FQ04

0.993

A0A182FA36

0.986

A0A182FL32

0.982

A0A182FR54

0.973

A0A182FNP0

0.970

A0A182FD65

0.965

A0A182FQS0

0.965

A0A182F1I4

0.964

A0A182FS17

0.941

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F1I4	A0A182F4Y4	Uncharacterized protein.	ERCC4 domain-containing protein.	0.964
A0A182F1I4	A0A182FA36	Uncharacterized protein.	Uncharacterized protein.	0.919
A0A182F1I4	A0A182FAU7	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.992
A0A182F1I4	A0A182FD65	Uncharacterized protein.	Uncharacterized protein.	0.874
A0A182F1I4	A0A182FL32	Uncharacterized protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.858
A0A182F1I4	A0A182FNP0	Uncharacterized protein.	Uncharacterized protein.	0.874
A0A182F1I4	A0A182FQ04	Uncharacterized protein.	ERCC4 domain-containing protein.	0.590
A0A182F1I4	A0A182FQS0	Uncharacterized protein.	ERCC4 domain-containing protein.	0.937
A0A182F1I4	A0A182FR54	Uncharacterized protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.741
A0A182F1I4	A0A182FS17	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A182F4Y4	A0A182F1I4	ERCC4 domain-containing protein.	Uncharacterized protein.	0.964
A0A182F4Y4	A0A182FA36	ERCC4 domain-containing protein.	Uncharacterized protein.	0.986
A0A182F4Y4	A0A182FAU7	ERCC4 domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.993
A0A182F4Y4	A0A182FD65	ERCC4 domain-containing protein.	Uncharacterized protein.	0.965
A0A182F4Y4	A0A182FL32	ERCC4 domain-containing protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.982
A0A182F4Y4	A0A182FNP0	ERCC4 domain-containing protein.	Uncharacterized protein.	0.970
A0A182F4Y4	A0A182FQ04	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.993
A0A182F4Y4	A0A182FQS0	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.965
A0A182F4Y4	A0A182FR54	ERCC4 domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.973
A0A182F4Y4	A0A182FS17	ERCC4 domain-containing protein.	Uncharacterized protein.	0.941