A0A182F618 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A182F618

Uncharacterized protein. (478 aa)

Predicted Functional Partners:

A0A182FGX5

0.932

A0A182F4X4

0.881

A0A182FKC0

0.854

A0A182FCD4

0.797

A0A182FSM0

0.797

A0A182FH97

0.787

A0A182FUS3

0.742

A0A182F3E7

0.740

A0A182FM94

0.728

A0A182FFJ2

0.722

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F3E7	A0A182F618	GFO_IDH_MocA domain-containing protein.	Uncharacterized protein.	0.740
A0A182F4X4	A0A182F618	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.	Uncharacterized protein.	0.881
A0A182F618	A0A182F3E7	Uncharacterized protein.	GFO_IDH_MocA domain-containing protein.	0.740
A0A182F618	A0A182F4X4	Uncharacterized protein.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.	0.881
A0A182F618	A0A182FCD4	Uncharacterized protein.	DAO domain-containing protein.	0.797
A0A182F618	A0A182FFJ2	Uncharacterized protein.	28S ribosomal protein S35, mitochondrial.	0.722
A0A182F618	A0A182FGX5	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A182F618	A0A182FH97	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.787
A0A182F618	A0A182FKC0	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.854
A0A182F618	A0A182FM94	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.728
A0A182F618	A0A182FSM0	Uncharacterized protein.	DAO domain-containing protein.	0.797
A0A182F618	A0A182FUS3	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.742
A0A182FCD4	A0A182F618	DAO domain-containing protein.	Uncharacterized protein.	0.797
A0A182FCD4	A0A182FKC0	DAO domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.804
A0A182FCD4	A0A182FM94	DAO domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.804
A0A182FFJ2	A0A182F618	28S ribosomal protein S35, mitochondrial.	Uncharacterized protein.	0.722
A0A182FGX5	A0A182F618	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A182FGX5	A0A182FM94	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.754
A0A182FH97	A0A182F618	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.787
A0A182FKC0	A0A182F618	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.854