A0A182F6J8 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182F6J8

Uncharacterized protein. (277 aa)

Predicted Functional Partners:

A0A182F4H6

0.992

A0A182FTG9

0.992

A0A182F9Z2

0.991

A0A182FJ76

0.991

A0A182F5K6

0.984

A0A182F3M2

0.983

A0A182FLX7

0.982

A0A182FLL8

0.971

A0A182FTB9

0.949

A0A182FQC2

0.921

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F3M2	A0A182F4H6	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
A0A182F3M2	A0A182F5K6	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 6 homolog.	0.999
A0A182F3M2	A0A182F6J8	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A182F3M2	A0A182F9Z2	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A182F3M2	A0A182FJ76	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A182F3M2	A0A182FLL8	Uncharacterized protein.	MI domain-containing protein.	0.958
A0A182F3M2	A0A182FLX7	Uncharacterized protein.	RNA helicase.	0.980
A0A182F3M2	A0A182FQC2	Uncharacterized protein.	RRP7 domain-containing protein.	0.998
A0A182F3M2	A0A182FTG9	Uncharacterized protein.	Uncharacterized protein.	0.941
A0A182F4H6	A0A182F3M2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.999
A0A182F4H6	A0A182F5K6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	U3 small nucleolar RNA-associated protein 6 homolog.	0.998
A0A182F4H6	A0A182F6J8	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.992
A0A182F4H6	A0A182F9Z2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.983
A0A182F4H6	A0A182FJ76	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD_REPEATS_REGION domain-containing protein.	0.997
A0A182F4H6	A0A182FLL8	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	MI domain-containing protein.	0.978
A0A182F4H6	A0A182FLX7	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	RNA helicase.	0.929
A0A182F4H6	A0A182FQC2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	RRP7 domain-containing protein.	0.997
A0A182F4H6	A0A182FTB9	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.902
A0A182F4H6	A0A182FTG9	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.930
A0A182F5K6	A0A182F3M2	U3 small nucleolar RNA-associated protein 6 homolog.	Uncharacterized protein.	0.999