A0A182FB10 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FB10

PSP domain-containing protein. (494 aa)

Predicted Functional Partners:

A0A182F6R6

0.983

A0A182F1L5

0.964

A0A182FBB9

0.765

A0A182FBW6

0.751

A0A182FSN8

0.749

A0A182FG54

0.687

A0A182FQA6

0.687

A0A182F7I9

0.664

A0A182FJ70

0.593

A0A182FQ03

0.548

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F1L5	A0A182F6R6	Uncharacterized protein.	RRM domain-containing protein.	0.975
A0A182F1L5	A0A182F7I9	Uncharacterized protein.	RNase_PH domain-containing protein.	0.998
A0A182F1L5	A0A182FB10	Uncharacterized protein.	PSP domain-containing protein.	0.964
A0A182F1L5	A0A182FBB9	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A182F1L5	A0A182FBW6	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A182F1L5	A0A182FG54	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.469
A0A182F1L5	A0A182FJ70	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A182F1L5	A0A182FQ03	Uncharacterized protein.	HRDC domain-containing protein.	0.999
A0A182F1L5	A0A182FSN8	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	0.862
A0A182F6R6	A0A182F1L5	RRM domain-containing protein.	Uncharacterized protein.	0.975
A0A182F6R6	A0A182F7I9	RRM domain-containing protein.	RNase_PH domain-containing protein.	0.667
A0A182F6R6	A0A182FB10	RRM domain-containing protein.	PSP domain-containing protein.	0.983
A0A182F6R6	A0A182FBB9	RRM domain-containing protein.	Uncharacterized protein.	0.862
A0A182F6R6	A0A182FBW6	RRM domain-containing protein.	Uncharacterized protein.	0.751
A0A182F6R6	A0A182FG54	RRM domain-containing protein.	Importin N-terminal domain-containing protein.	0.696
A0A182F6R6	A0A182FJ70	RRM domain-containing protein.	Uncharacterized protein.	0.666
A0A182F6R6	A0A182FQ03	RRM domain-containing protein.	HRDC domain-containing protein.	0.683
A0A182F6R6	A0A182FQA6	RRM domain-containing protein.	Uncharacterized protein.	0.696
A0A182F6R6	A0A182FSN8	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	0.423
A0A182F7I9	A0A182F1L5	RNase_PH domain-containing protein.	Uncharacterized protein.	0.998